klebsiella

UPHL's Reference Free Pipeline

Visualisation application for Klebsiella genotypes generated by Kleborate.

Ordered Mapping and Assignment for Plasmid Identification from NGS data for KP

Kaptive databases for the Klebsiella oxytoca Species Complex (and Klebsiella indica)

Genomic surveillance of E. coli ST10, ST131, and ST167 across Africa and Jordan. Highlights blaNDM-5-driven MDR in ST167 and widespread Klebsiella-like K-loci, alongside the classic ExPEC profile of ST131.

Kaptive databases for the Klebsiella pneumoniae Species Complex

LLM-powered classification of phage protein functions to identify strong lytic candidates against Klebsiella, using transfer learning and biological embeddings.

A bioinformatics pipeline for bacterial genome assembly, species identification, antimicrobial resistance profiling, and plasmid characterization.

GenoWall — genomic antibiotic resistance prediction with calibrated confidence (Hack-Nation)

KoSCAPEbio is a QIIME 2 plugin designed for the exploration and analysis of the Klebsiella oxytoca species complex (KoSC) presence within microbial communities.