UPHL's Reference Free Pipeline
docker bioinformatics genomics nextflow ngs phylogenetics illumina denovo-assembly serotyping salmonella prokaryotes antimicrobial-resistance nontuberculous-mycobacteria legionella vibrio klebsiella acinetobacter shigella neisseria group-a-streptococcus
-
Updated
Oct 9, 2026 - Nextflow