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@veg

iGEM/UCSD evolutionary biology and bioinformatics group

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  1. hyphy hyphy Public

    HyPhy 2.5.x (Maintenance Mode — bug fixes only). All active development has moved to HyPhy 3: https://github.com/veg/hyphy-3

    HyPhy 275 72

  2. hivtrace hivtrace Public

    JavaScript 23 15

  3. phylotree.js phylotree.js Public

    Interactive viewer of phylogenetic trees

    JavaScript 204 78

Repositories

Showing 10 of 120 repositories
  • rhizaeon-code Public

    Rhizaeon recombination detection

    veg/rhizaeon-code's past year of commit activity
    HTML 0 MIT 1 2 0 Updated Oct 15, 2026
  • hyphy-3 Public

    HyPhy v3. We are not in 1997 anymore

    veg/hyphy-3's past year of commit activity
    C++ 4 2 0 0 Updated Oct 15, 2026
  • phylotree.js Public

    Interactive viewer of phylogenetic trees

    veg/phylotree.js's past year of commit activity
    JavaScript 204 MIT 78 4 5 Updated Oct 14, 2026
  • HyphAeon Public
    veg/HyphAeon's past year of commit activity
    Python 12 MIT 4 26 3 Updated Oct 14, 2026
  • trace-5.0 Public

    HIV-TRACE 5.0

    veg/trace-5.0's past year of commit activity
    Python 0 MIT 1 4 0 Updated Oct 14, 2026
  • hyphy Public

    HyPhy 2.5.x (Maintenance Mode — bug fixes only). All active development has moved to HyPhy 3: https://github.com/veg/hyphy-3

    veg/hyphy's past year of commit activity
    HyPhy 275 72 10 0 Updated Oct 13, 2026
  • SINTEZ Public

    Structural Inference by Neural Translation and Energy Zero-shot / Gene Prediction in Neglected Genomes

    veg/SINTEZ's past year of commit activity
    Python 0 MIT 0 0 0 Updated Oct 13, 2026
  • datamonkey-js Public

    Datamonkey - Run state-of-the-art statistical models through the comfort of your browser

    veg/datamonkey-js's past year of commit activity
    JavaScript 10 10 0 7 Updated Oct 13, 2026
  • hivtrace-locales Public

    Repository of hivtrace translations

    veg/hivtrace-locales's past year of commit activity
    0 0 0 1 Updated Oct 12, 2026
  • datamonkey-js-server Public
    veg/datamonkey-js-server's past year of commit activity
    JavaScript 3 7 0 4 Updated Oct 10, 2026
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