biocomputing

Bio-Computing Platform Featuring Large-Scale Representation Learning and Multi-Task Deep Learning “螺旋桨”生物计算工具集

A Python package for the simulation of organoids for the purpose of studying Organoid Intelligence (OI) and Organoid Learning (OL).

Concept paper for using living mycelium as a self-repairing substrate for AI, plus a Python prototype: scikit-learn models that predict mycelium growth from environmental readings, served with FastAPI. Bring your own data; no bio-interface yet.

A closed-loop UDP interface between Cortical Labs' CL1 biocomputer and Unreal Engine: receive living-neuron spikes as gameplay events, send electrical stimulation back as feedback.

A Bidirectional LSTM Network and EEG-Response Organoid for simulating neural responses to classical piano music.

bio-inspired computing course assignments and projects, Fall-2018

Projects written in CELLO

The content of this repository belongs to the Bio-Computing coursework of my Integrated BS-MS in Biology from Indian Institute of Science Education and Research Mohali, India.

A curated list of awesome Biological Computing (Biocomputing) resources.

NeuroBridge API — 123 endpoints, 55+ analysis modules for brain organoid data. Organoid IQ, STDP, attractors, consciousness metrics, and more.

Single Python Script to mutate polygons and evaluate their fitness based on a target image.

Using K Means and R Language, K-Means algorithm applied the elbow method to get the optimal k, which is equal to 7.

Aurora Survival BioCLIP - iOS native

No-framework browser visualizer for cl-sdk simulator streams, recording replay, and channel-grid/3D previews.

Applied Particle Swarm Optimization (PSO) to find global maxima and minima of multivariable functions.

OrganoidIntelligence: brain-organoid-on-chip intelligence, wetware computing, and bioelectronic roadmaps

Replicating a Multi-Functional Synthetic Gene Network

WebCM is a web platform used to develop and run bacterial simulations

Verified a 4-state Deterministic Finite Automata (DFA) using multi McCulloch–Pitt neural networks.

🧠 Organoid Intelligence Biocomputer Simulator — HH + Izhikevich neuron models, MEA burst detection, DishBrain Pong, Baltimore Declaration ethics monitor. Built by Antigravity (Google DeepMind).