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  1. WILDkCAT WILDkCAT Public

    Extract, Retrieve and Predict kcat values for a metabolic model

    HTML 10

  2. FALCON FALCON Public

    FALCON: A Toolbox for the Fast Contextualization of Logical Networks

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  3. rFASTCORMICS rFASTCORMICS Public

    MATLAB 7 1

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    Drug repositioning of single and drug combinations using Flux Balance Analysis.

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Showing 10 of 46 repositories
  • WILDkCAT Public

    Extract, Retrieve and Predict kcat values for a metabolic model

    sysbiolux/WILDkCAT's past year of commit activity
    HTML 10 MIT 0 1 0 Updated Oct 14, 2026
  • TackleMMe Public
    sysbiolux/TackleMMe's past year of commit activity
    MATLAB 2 0 4 0 Updated Sep 10, 2026
  • AKR1A1-Deficiency-in-Cancer-Metabolic-Modeling Public

    Genome-scale metabolic modeling workflow investigating AKR1A1 deficiency as a metabolic vulnerability in renal cell carcinoma and hepatocellular carcinoma. Integrates cell-line and TCGA tumor RNA-seq data with rFASTCORMICS/Recon3D reconstruction, FBA, FVA, flux sampling, flux-sum analysis, and IDARE/Cytoscape visualization.

    sysbiolux/AKR1A1-Deficiency-in-Cancer-Metabolic-Modeling's past year of commit activity
    MATLAB 1 0 0 0 Updated Jul 14, 2026
  • rFastcormics4cobra_09062026 Public Forked from opencobra/cobratoolbox

    The COnstraint-Based Reconstruction and Analysis Toolbox. Documentation:

    sysbiolux/rFastcormics4cobra_09062026's past year of commit activity
    MATLAB 0 345 0 0 Updated Jun 24, 2026
  • rFASTCORMICS Public
    sysbiolux/rFASTCORMICS's past year of commit activity
    MATLAB 7 LGPL-3.0 1 1 0 Updated Jun 24, 2026
  • SLFN11_figure Public

    short script for figure in SLFN11 review paper

    sysbiolux/SLFN11_figure's past year of commit activity
    Python 0 MIT 0 0 0 Updated Jun 16, 2026
  • sysbiolux/Valceschini_et_al_2025's past year of commit activity
    R 0 0 0 0 Updated May 22, 2026
  • sysbiolux/ISB705MetabolicNetworkModeling's past year of commit activity
    HTML 1 1 0 0 Updated May 7, 2026
  • MetabolicMediaLibrary Public Forked from h-escoffier/MetabolicMediaLibrary

    A repository dedicated to standardizing culture media definitions for genome-scale metabolic modeling.

    sysbiolux/MetabolicMediaLibrary's past year of commit activity
    Julia 0 MIT 3 0 0 Updated Mar 26, 2026
  • Clinical_Biomarker_Detection Public

    DRIVEN-DTU WP13: Biomarker Detection In Clinical Cohort Data Using Machine Learning

    sysbiolux/Clinical_Biomarker_Detection's past year of commit activity
    Python 0 GPL-3.0 0 0 0 Updated Feb 6, 2026