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Saving simulation gives error #44
Description
Traceback (most recent call last):
File "/mnt/data/daten/PostDoc2/home/Downloads/GO-RXR/GUI_GO.py", line 9002, in _saveSimulation
ds.saveSimulationHDF5(self.fname, sim_dict, self.version)
File "/mnt/data/daten/PostDoc2/home/Downloads/GO-RXR/UTILS/data_structure.py", line 492, in saveSimulationHDF5
simulated = f['Simulated_data']
~^^^^^^^^^^^^^^^^^^
File "h5py/_debian_h5py_serial/_objects.pyx", line 54, in h5py._debian_h5py_serial._objects.with_phil.wrapper
File "h5py/_debian_h5py_serial/_objects.pyx", line 55, in h5py._debian_h5py_serial._objects.with_phil.wrapper
File "/usr/lib/python3/dist-packages/h5py/_debian_h5py_serial/_hl/group.py", line 357, in __getitem__
oid = h5o.open(self.id, self._e(name), lapl=self._lapl)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "h5py/_debian_h5py_serial/_objects.pyx", line 54, in h5py._debian_h5py_serial._objects.with_phil.wrapper
File "h5py/_debian_h5py_serial/_objects.pyx", line 55, in h5py._debian_h5py_serial._objects.with_phil.wrapper
File "h5py/_debian_h5py_serial/h5o.pyx", line 189, in h5py._debian_h5py_serial.h5o.open
KeyError: "Unable to open object (object 'Simulated_data' doesn't exist)"
Activity
jpcurbelo commentedon Sep 25, 2024
Hi! I wasn't able to reproduce exactly this issue, although, got
KeyError: "Unable to synchronously open object (object 'Simulated_data' doesn't exist)"when saving the simulation. However, ademo.h5file is saved in the root dir as expected. We are working on fixing this and improving the saving process. In the meantime, could you, please, let us know if any file was saved when you tried? Thanks.jpcurbelo commentedon Nov 19, 2024
We have implemented some updates to the load/save menus:
1- Got rid of the Load/Save Orbitals entries. Commented the functions
_loadOrbitalsand_saveOrbitalsand added this comment: "This should be implemented/updated on Jordan's update - summer 2024".2- Save Simulation/Sample/Summary are disable when the GUI is loaded. Save Simulation is also enabled after Import Dataset or Load ReMagX.
optimizationFinished._loadFile) or load sample (_loadSample)_loadFile) or Save Workspace As (_saveAsFile). This procedure eliminates the issue the reviewer noticed - error when trying to save the simulation before saving the workspace.