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@ga4gh

Global Alliance for Genomics and Health

An international coalition, formed to enable the sharing of genomic and clinical data.

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  1. ga4gh-schemas ga4gh-schemas Public archive

    Models and APIs for Genomic data. RETIRED 2018-01-24

    Python 220 112

  2. benchmarking-tools benchmarking-tools Public

    Repository for the GA4GH Benchmarking Team work developing standardized benchmarking methods for germline small variant calls

    HTML 212 46

  3. phenopacket-schema phenopacket-schema Public

    Repository for the GA4GH phenopacket schema

    Java 102 33

  4. vrs vrs Public

    Extensible specification for representing and uniquely identifying biological sequence variation

    Jupyter Notebook 100 43

  5. ga4gh-server ga4gh-server Public archive

    Reference implementation of the APIs defined in ga4gh-schemas. RETIRED 2018-01-24

    Python 98 91

  6. task-execution-schemas task-execution-schemas Public

    98 32

Repositories

Showing 10 of 175 repositories
  • quality-control-wgs Public

    GA4GH Quality Control of Whole Genome Sequencing's metrics definition, benchmark resources and reference implementations

    ga4gh/quality-control-wgs's past year of commit activity
    Jupyter Notebook 26 Apache-2.0 7 4 3 Updated Oct 21, 2026
  • refcloud-api Public Forked from ga4gh/ga4gh-starter-kit-drs

    Open, extensible server implementation of the GA4GH Data Repository Service (DRS) specification

    ga4gh/refcloud-api's past year of commit activity
    Java 0 Apache-2.0 10 0 1 Updated Oct 20, 2026
  • refcloud-cli Public

    Data onboarding for the GA4GH Reference Cloud

    ga4gh/refcloud-cli's past year of commit activity
    0 Apache-2.0 0 0 1 Updated Oct 20, 2026
  • ga4gh-doi Public
    ga4gh/ga4gh-doi's past year of commit activity
    0 Apache-2.0 0 2 2 Updated Oct 20, 2026
  • vrs-python Public

    GA4GH Variation Representation Python Implementation

    ga4gh/vrs-python's past year of commit activity
    Python 64 Apache-2.0 45 66 11 Updated Oct 20, 2026
  • gkm-starter-kit Public

    A single community-facing entry point that helps someone understand and adopt GKS in practice.

    ga4gh/gkm-starter-kit's past year of commit activity
    Python 2 CC0-1.0 1 3 3 Updated Oct 20, 2026
  • GA4GH-RegBot Public
    ga4gh/GA4GH-RegBot's past year of commit activity
    Python 8 MIT 10 0 18 Updated Oct 20, 2026
  • ga4gh-agentic-harness-mcp Public Forked from mfiume/ga4gh-agentic-harness-mcp

    Universal MCP server for GA4GH services and the GA4GH Implementation Registry (DRS/TRS/WES + generic service-info), with pluggable auth and dual stdio/HTTP transports.

    ga4gh/ga4gh-agentic-harness-mcp's past year of commit activity
    Python 2 Apache-2.0 1 0 2 Updated Oct 19, 2026
  • gif-project-federated-learning Public

    A GIF repository to host configs, tutorials, scripts, etc for the GIF Federated Learning project

    ga4gh/gif-project-federated-learning's past year of commit activity
    Python 1 Apache-2.0 0 30 0 Updated Oct 19, 2026
  • TASC Public

    TASC aids the harmonisation of aspects of GA4GH's various products that would otherwise prevent different products from being used together conveniently.

    ga4gh/TASC's past year of commit activity
    Python 12 8 29 6 Updated Oct 19, 2026