Shelley fails to build LAST due to SHPC registry validation error #22

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1. jieru660

   added

   bugSomething isn't workingSomething isn't working

   on Sep 16, 2026
2. fredjaya commented on Sep 21, 2026

   

   fredjaya

   on Sep 21, 2026

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   Hi Jieru, thanks for reporting this. Looks like it errors as last doesn't follow semantic versioning. I will patch this over the next week.

   Error for reference:

   ❌ shpc install failed for quay.io/biocontainers/last:1654--h5814d7d_0:
   Traceback (most recent call last):
     File "/opt/shpc/bin/shpc", line 8, in <module>
       sys.exit(run_shpc())
                ^^^^^^^^^^
     File "/opt/shpc/singularity-hpc/shpc/client/__init__.py", line 556, in run_shpc
       main(args=args, parser=parser, extra=extra, subparser=helper)
     File "/opt/shpc/singularity-hpc/shpc/client/install.py", line 27, in main
       cli.install(
     File "/opt/shpc/singularity-hpc/shpc/main/modules/base.py", line 453, in install
       module = kwargs.get("module") or self.get_module(
                                        ^^^^^^^^^^^^^^^^
     File "/opt/shpc/singularity-hpc/shpc/main/modules/base.py", line 431, in get_module
       config = self._load_container(module.name)
                ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
     File "/opt/shpc/singularity-hpc/shpc/main/client.py", line 116, in _load_container
       config = self.load_registry_config(name)
                ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
     File "/opt/shpc/singularity-hpc/shpc/main/client.py", line 104, in load_registry_config
       return container.ContainerConfig(result)
              ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
     File "/opt/shpc/singularity-hpc/shpc/main/container/config.py", line 82, in __init__
       self.validate()
     File "/opt/shpc/singularity-hpc/shpc/main/container/config.py", line 296, in validate
       jsonschema.validate(instance=self.entry._config, schema=schemas.containerConfig)
     File "/opt/shpc-env/lib/python3.12/site-packages/jsonschema/validators.py", line 1332, in validate
       raise error
   jsonschema.exceptions.ValidationError: 'latest' is a required property
   
3. fredjaya commented on Sep 23, 2026

   

   fredjaya

   on Sep 23, 2026

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   Hi @jieru660,

   Thanks for reporting this issue. I have updated shelley to resolve this error and confirmed that lastal and lastdb are callable after running shelley build last and module load last.

   Could you please update your version of shelley with:

   sudo env UV_TOOL_DIR=/opt/uv/tools UV_TOOL_BIN_DIR=/usr/local/bin \
     /opt/uv/uv tool install --python 3.12 git+https://github.com/Sydney-Informatics-Hub/shelley@bioshell-22

   Then try build, load and run last as you did previously.

   Let me know how it goes!